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CAP3 Sequence Assembly Program Enter your sequences in FASTA format (no more than 50 kb): This form allows you to assemble a set of contiguous sequences (contigs) with the CAP3 program.
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The PRABI-Doua is devoted to bioinformatics tools available...
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The PRABI-Doua is devoted to bioinformatics tools available...
- Software and Packages
Manuals and User Guides for Ariens 306cc Series. We have 3 Ariens 306cc Series manuals available for free PDF download: Operation Manual
The PRABI-Doua is devoted to bioinformatics tools available on-line or as downloadable software. Those tools are devoted to various research fields such as molecular evolution, phylogeny, comparative genomics, sequence databases and statistics in ecology.
1 wrz 1999 · Results of CAP3 on four BAC data sets are presented. The performance of CAP3 was compared with that of PHRAP on a number of BAC data sets. PHRAP often produces longer contigs than CAP3 whereas CAP3 often produces fewer errors in consensus sequences than PHRAP.
CAP3 can be used in GAP4 of the Staden package. The improved program is named CAP3. These improvements allow CAP3 to take longer sequences of higher errors and produce more accurate consensus sequences. A forward-reverse constraint is often produced by sequencing both ends of a subclone.
1 wrz 1999 · We describe the third generation of the CAP sequence assembly program. The CAP3 program includes a number of improvements and new features. The program has a capability to clip 5' and 3' low-quality regions of reads.
20 lis 2014 · CAP3 (CONTIG ASSEMBLY PROGRAM Version 3) is a sequence assembly program for small-scale assembly with or without quality values. Click this link to open CAP3 homepage. CAP3 is embedded as an external tool into UGENE.
