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Automated comparative protein structure modeling with SWISS-MODEL and Swiss-PdbViewer: A historical perspective.
- Modelling
The SWISS-MODEL Interactive Workspace provides a personal...
- Repository
The aim of the SWISS-MODEL Repository is to provide access...
- Documentation
GMQE (Global Model Quality Estimate) is a quality estimate...
- Template Library
SWISS-MODEL Template Library (SMTL) SMTL aggregates...
- 3D-Beacons API
SWISS-MODEL is a fully automated protein structure...
- Annotation Projects
The SWISS-MODEL Repository is a database of annotated 3D...
- TBvar3D
TBvar3D is a web server for mapping and analysis of M....
- Structure Assessment
Chętnie wyświetlilibyśmy opis, ale witryna, którą oglądasz,...
- Modelling
Search thousands of DNA-protein complex structures based on features of the DNA, protein or DNA-protein interactions. Visualize data using customizable, interactive visualizations.
5 lis 2021 · PRIME 2.0.1 predicts the full-atom model of protein-DNA complex structure based on the 3D structure template of protein and DNA. DNA plays a key role in the protein-DNA complexes structure prediction.
1 maj 2006 · Molecular modeling tools can model a protein's structure based on a previously known homologous structure, so it is possible to use the structural information to design ligands for proteins for which no structure is known.
14 lis 2024 · Evo generalizes across DNA, RNA, and proteins, enabling zero-shot function prediction competitive with domain-specific language models and the generation of functional CRISPR-Cas and transposon systems, representing the first examples of protein-RNA and protein-DNA codesign with a language model.
10 sty 2022 · Here, we review the emerging use of large-scale genetic datasets and deep learning approaches to model protein structures and their interactions, and discuss the integration of structural data from different sources.
30 paź 2024 · Several methods have been developed to model DNA/RNA structures from cryo-EM maps, though they face different limitations either in automation or accuracy. RCrane 33 is developed as an...
