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31 sie 2000 · At 6.3 million base pairs, this is the largest bacterial genome sequenced, and the sequence provides insights into the basis of the versatility and intrinsic drug resistance of P. aeruginosa.
Pseudomonas Genome Database version 22.1 released. 4883 curated updates to annotations. New Pseudomonas genomes added and older versions of assemblies have been removed. Database now has 7982 Pseudomonas aeruginosa genomes and 14229 Pseudomonas genomes overall.
6 sty 2020 · Remarkably, sequencing of the PAO1 subline (MPAO1) as well as PAO1-DSM strain stored at the German Collection for Microorganisms and Cell Cultures revealed presence of multiple nucleotide polymorphisms and short insertions-deletions (indels) relative to the reference PAO1-UW .
The sequence reads were mapped to the PAO1-UW reference sequence (NC_002516) using Illumina's ELAND aligner (efficient large-scale alignment of nucleotide databases). ELAND aligns a large number of short reads to reference sequences, allowing up to two mismatches in the first 32 bases of a read.
22 cze 2021 · PAO1 has been the established choice for basic studies of P. aeruginosa physiology and metabolism (1), was the first P. aeruginosa strain to be mapped genetically (2), and was the first to have its genome sequenced (3).
Taking the existing PAO1-UW genome sequence (named after the University of Washington, which led the sequencing project) as a blueprint, the genome sequences of reference strains MPAO1 and PAO1-DSM (stored at the German Collection for Microorganisms and Cell Cultures [DSMZ]) were resolved by physical mapping and deep short read sequencing-by ...
15 lut 2010 · Complete genome sequence of Pseudomonas aeruginosa PAO1, an opportunistic pathogen. Nature 406 : 959-964.
