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The Geographic Distance Matrix Generator is a platform-independent Java application that implements the same powerful suite of spherical functions as the Perpendicular Distance Calculator to compute all pair wise distances from a simple list of geographic coordinates.
Input consists of raw data or distance matrices in appropriate GenAlEx format (see the ‘Data Format in GenAlEx’ section). In order to proceed with an analysis the worksheet containing
In our framework, we have designed two strategies to accelerate the computation based on 1) cell graph coarse-graining, and 2) gene graph sparsification. Briefly, cell graph coarse-graining aims to reduce the cell number by aggregating nearest cells into “meta-cells”.
16 cze 2018 · GenAlEx: Genetic Analysis in Excel is a popular cross platform package for population genetic analysis that runs within Microsoft Excel. GenAlEx offers analysis of codominant, haploid and binary genetic loci and DNA sequences.
genalex is a user-friendly cross-platform package that runs within Microsoft Excel, enabling population genetic analyses of codominant, haploid and binary data. Allele frequency-based analyses include heterozygosity, F statistics, Nei's genetic.
20 lip 2012 · GenAlEx offers analysis of diploid codominant, haploid and binary genetic loci and DNA sequences. Both frequency-based ( F -statistics, heterozygosity, HWE, population assignment, relatedness) and distance-based (AMOVA, PCoA, Mantel tests, multivariate spatial autocorrelation) analyses are provided.
1 mar 2006 · Distance-based calculations include AMOVA, principal coordinates analysis (PCA), Mantel tests, multivariate and 2D spatial autocorrelation and TWOGENER.
