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3 dni temu · Quick index search. Sample-distance and similarity matrices. Relationship/covariance. --make-rel ['cov'] ['meanimpute'] [ {square | square0 | triangle}] [ {zs | bin | bin4}] --make-rel is the primary interface to PLINK's genetic relationship matrix and covariance matrix calculator.
2 dni temu · Use VectorBuilder's free sequence alignment tool to identify regions of similarity between any two DNA or protein sequences of your interest.
4 dni temu · Force Field X (FFX) is an open-source software platform for atomic resolution modeling of organic materials and biomolecules that leverages molecular mechanics (MM) force fields and a family of novel electrostatics, 1–3 optimization, 4,5 thermodynamics, 6–8 and experimental refinement algorithms. 9–11 This article introduces the unique computational models and algorithms available in FFX ...
5 dni temu · We present the first combinatorial proof of the Graham-Pollak Formula for the determinant of the distance matrix of a tree, via sign-reversing involutions and the Lindström-Gessel-Viennot Lemma.
25 cze 2024 · y = G β G + X β X + e. for every variant (one at a time), where y is the phenotype vector, G is the genotype/dosage matrix for the current variant, X is the fixed-covariate matrix, and e is the error term subject to least-squares minimization.
4 dni temu · Use VectorBuilder's free GC content calculator to analyze the GC content of any DNA sequence of interest. Design your own custom vectors at vectorbuilder.com.
3 dni temu · Method to calculate genomic relationship matrix (GRM). We offer the following methods; "addNOIA", "domNOIA", "A.mat", "linear", "gaussian", "exponential", "correlation". For NOIA methods, please refer to Vitezica et al. 2017.
